Fmoc-D-valine

    • Product Name: Fmoc-D-valine
    • Factroy Site: Yudu County, Ganzhou, Jiangxi, China
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    • Manufacturer: Ascent Petrochem Holdings Co., Limited
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    Specifications
    HS Code 389556
    Product Name Fmoc-D-valine
    Iupac Name (2R)-2-{[(9H-fluoren-9-ylmethoxy)carbonyl]amino}-3-methylbutanoic acid
    Cas Number 84624-17-9
    Molecular Formula C20H21NO4
    Molecular Weight 339.39 g/mol
    Appearance White to off-white crystalline powder
    Melting Point 144-146 °C
    Optical Rotation [α]D +12.0° (c = 1, DMF)
    Purity ≥98% (HPLC)
    Solubility Soluble in DMF, DMSO, dichloromethane, and methanol
    Storage Conditions Store at 2-8 °C, protected from light and moisture

    As an accredited Fmoc-D-valine factory, we enforce strict quality protocols—every batch undergoes rigorous testing to ensure consistent efficacy and safety standards.

    Packing & Storage
    Packing Fmoc-D-valine is supplied as a white crystalline powder in a sealed glass bottle, available in quantities of 5 g and 25 g.
    Container Loading (20′ FCL) 20′ FCL: Fmoc-D-valine loaded in sealed, dry containers on pallets, protected from moisture, secured for safe transport.
    Shipping Fmoc-D-valine is shipped at ambient temperature in sealed, moisture-resistant containers, protected from light. Ensure packaging prevents leakage and contamination during transit. Handle with standard laboratory precautions, avoid prolonged heat exposure, and comply with relevant chemical transport regulations for safe delivery.
    Storage Store Fmoc-D-valine in a tightly sealed container, protected from light and moisture. Keep it in a cool, dry place, ideally between 2–8 °C. Avoid repeated temperature fluctuations and exposure to air, which can cause degradation. Ensure the container is properly labeled and kept away from incompatible materials.
    Shelf Life Store at -20°C, desiccated, and protected from light; shelf life is typically up to three years under recommended conditions.
    Application of Fmoc-D-valine

    Fmoc-D-valine (C20H21NO4, 339.39 g/mol) is received as a crystalline solid and used as a protected chiral building block in solid-phase peptide synthesis (SPPS). The material is dissolved in anhydrous DMF at 0.10–0.30 M before automated coupling. In a C-terminal peptide acid route, Fmoc-D-valine is anchored to 2-chlorotrityl chloride resin with substitution 0.8–1.5 mmol/g in anhydrous dichloromethane using 4 equiv DIPEA relative to resin loading. The anchor reaction proceeds at 20–25°C for 60 min, and unreacted chloride sites are capped with methanol for 15 min. Fmoc removal is performed with 20% v/v piperidine in DMF using two 5 min treatments followed by a 15 min treatment. The piperidine effluent is monitored at 301 nm to quantify the dibenzofulvene adduct. When Fmoc-D-valine is introduced as an incoming amino acid above a resin-bound amine, coupling is completed with HBTU/HOBt/DIPEA at 4 equiv amino acid, 4 equiv HBTU, 4 equiv HOBt, and 8 equiv DIPEA in DMF. A 30 min room-temperature coupling is followed by a Kaiser test; a second coupling is applied when resin beads remain blue. This double-coupling sequence addresses the β-branched steric hindrance of valine and avoids incomplete chain extension in D-Val-containing therapeutic peptide acids.

    Following linear assembly, the peptide is cleaved from 2-chlorotrityl resin with TFA/triisopropylsilane/water (95:2.5:2.5 v/v/v) at 20°C for 2 h. The filtrate is concentrated and precipitated in cold methyl tert-butyl ether; the precipitate is lyophilized to a white powder. Preparative reverse-phase HPLC on a C18 column with 0.1% TFA water/acetonitrile gradient provides the final peptide acid. In GMP peptide API production, Fmoc-D-valine is received under ICH Q7 starting-material controls; analytical release includes HPLC area normalization ≥98.0% by USP <621>, residual solvent testing under ICH Q3C, and enantiomeric purity by chiral HPLC. Residual L-valine is treated as a critical impurity because D/L inversion produces a diastereomeric peptide that co-purifies with the target and may alter pharmacological activity. D-Val-containing peptide acids are then formulated as acetate or trifluoroacetate salts for downstream lyophilized drug product.

    Why Does Microwave-Assisted Fmoc-D-Valine Coupling Require Racemization Monitoring at 50–60°C?

    Microwave-assisted SPPS accelerates Fmoc-D-valine coupling on β-branched sequences, but the same thermal input can promote oxazolone formation and D-to-L inversion. Automated synthesizers such as the CEM Liberty Blue or Biotage Alstra use fiber-optic temperature feedback in PTFE reaction vessels; a standard Fmoc-D-valine cycle uses 3 equiv Fmoc-D-valine, 3 equiv DIC, and 3 equiv Oxyma in DMF at 50°C for 10 min, followed by a second coupling at 60°C for 10 min. Deprotection uses 20% v/v piperidine/DMF at 90°C for 60 s followed by a second 3 min treatment. The primary process conflict is that D-Val is β-branched; conventional room-temperature coupling with DIC/HOBt can leave residual free amine, yet excessive microwave cycling raises the risk of configurational erosion. Therefore, the crude linear peptide is analyzed by LC-MS after a stepwise miniature cleavage. Diastereomeric peptide by-products containing L-valine are separated on a C18 column at 40°C with 0.1% formic acid in water/acetonitrile; detection is at 214 nm. The acceptance threshold for the L-Val diastereomer is typically ≤0.5% by UV area. Where coupling yields are incomplete, a third 5 min coupling with 2 equiv Fmoc-D-valine and DIC/Oxyma is inserted before capping.

    Resin-bound reaction progress is monitored with the bromophenol blue test for secondary amines; a colorless or pale-yellow bead state indicates completion, while persistent blue signals require extension of the coupling cycle. Because Fmoc-D-valine has a free acid group, its dissolution in DMF must be complete prior to activation; turbid solutions can produce variable equivalents and lower coupling repeatability. The product is typically advanced without isolation of the protected intermediate. For APIs intended for human use, the diastereomer is controlled in the final peptide by ICH Q6B specification; if the L-Val impurity cannot be removed by preparative HPLC, the microwave cycle is replaced with 20°C HATU/HOAt double coupling. This fallback reduces throughput but preserves enantiopurity.

    Coupling systemSolventTemperatureCycle timeCompletion testProcess note
    HBTU/HOBt/DIPEADMF20–25°C2 × 30 minKaiser testStandard room-temperature loop; second coupling required for β-branched D-Val
    DIC/OxymaDMF50–60°C2 × 10 minBromophenol blue testMicrowave-assisted; racemization monitoring required
    HATU/HOAt/DIPEADMF20–25°C2 × 20 minFmoc UV at 301 nmHigh activation; used for difficult sequences
    PyBOP/HOBt/DIPEANMP20–25°C2 × 30 minKaiser testSplit-and-pool library synthesis

    Rheological Failure Envelope of Fmoc-D-Valine-Capped Peptide Gelators

    Short Fmoc-capped peptides containing D-valine are prepared as candidate low-molecular-weight gelators for injectable depot research. The Fmoc-D-valine residue is introduced at the N-terminus of a dipeptide or tripeptide via standard Fmoc-SPPS on a 2-chlorotrityl chloride resin. The crude peptide is purified by RP-HPLC and lyophilized; gelation is triggered by pH adjustment, solvent switch from DMSO to water, or thermal annealing at 80°C followed by cooling to 25°C. Oscillatory rheology is performed on an Anton Paar MCR 302 with a 40 mm parallel-plate geometry and a 1 mm gap. An amplitude sweep at 1 Hz identifies the linear viscoelastic region; a subsequent frequency sweep from 0.1 Hz to 10 Hz at 0.1% strain records storage modulus G′ and loss modulus G″. A gel is defined operationally as G′ exceeding G″ at 5 Hz. Published data for the D-valine configuration in this exact Fmoc-capped peptide gelator class is limited, and the absolute rheological values depend on the paired L-amino acid, terminal charge, and ionic strength. D-valine may invert the supramolecular chirality observed by circular dichroism without necessarily raising gel stiffness. The process window is narrow: gelation can be suppressed below 0.5 wt% peptide and can phase-separate above 2.0 wt% depending on sequence. Syringeability through a 27 G needle is assessed by extrusion force; gels with yield stress above 200 Pa may require larger-gauge administration needles.

    The terminal use is generally confined to non-implantable or laboratory models because the fluorenylmethoxycarbonyl group is not a pharmaceutically cleared fragment for parenteral depots. Cytocompatibility is assessed with ISO 10993-5 elution assays on L929 fibroblasts; leachables data are generated by LC-MS and total organic carbon, with acceptance limits defined by the intended route of administration. Fmoc-D-valine-containing gelators are therefore screened in vitro rather than directly progressed into GMP medical device manufacturing. Batch-to-batch variability in gel stiffness is minimized by lyophilized peptide storage at −20°C under argon, because Fmoc group hydrolysis at ambient humidity can reduce gelator solubility.

    Split-and-pool peptide library production uses Fmoc-D-valine as a chirally defined diversification monomer. The resin is typically TentaGel S RAM with a Rink amide linker at 0.2–0.3 mmol/g. Fmoc deprotection is carried out with 20% v/v piperidine/DMF for 20 min, and the resin is washed with DMF, dichloromethane, and methanol. For each coupling position, the resin is split into reaction vessels; Fmoc-D-valine is activated with PyBOP/HOBt/DIPEA at 4 equiv Fmoc-D-valine, 4 equiv PyBOP, 4 equiv HOBt, and 8 equiv DIPEA in NMP at 20–25°C for 30 min. A second 30 min coupling is used because β-branched valine on library resin often shows incomplete acylation. Unreacted amines are capped with acetic anhydride/pyridine (1:1 v/v) for 10 min. After washing, resin-bound peptides are cleaved with TFA/triisopropylsilane/water (95:2.5:2.5 v/v/v) for 3 h. The peptide libraries are precipitated in cold methyl tert-butyl ether, reconstituted in 50% acetonitrile/water, and lyophilized. Analytical validation uses LC-MS with a C18 column, 0.1% formic acid modifier, and a 5–60% acetonitrile gradient over 20 min; MALDI-TOF mass spectra confirm peptide identity. D-valine incorporation is confirmed by MS/MS fragmentation and, where required, by acid hydrolysis and chiral amino acid analysis. These libraries are terminal research reagents for epitope mapping, enzyme substrate determination, and on-bead screening. The D-valine residue is selected to increase chemical diversity and to probe chiral recognition by the target receptor; it is not a GMP drug substance.

    When Fmoc-D-Valine Is Introduced as a Degradation-Resistant Substitution in Peptide Amides

    Fmoc-D-valine is used during SPPS to insert a D-amino acid at a peptide amide position that otherwise undergoes serine protease cleavage. The final peptide is assembled on Rink amide MBHA resin at 0.4–0.6 mmol/g; Fmoc-D-valine is coupled with HATU/HOAt/DIPEA at 4 equiv, 4 equiv, and 8 equiv in DMF for 25 min at 20°C. Double coupling is applied routinely. After TFA cleavage and RP-HPLC purification, the peptide amide is subjected to in vitro plasma stability testing in EDTA-anticoagulated human plasma at 37°C, with sampling at 0 h, 0.5 h, 1 h, 2 h, 4 h, 8 h, and 24 h. Samples are precipitated with acetonitrile containing 0.1% formic acid; the supernatant is analyzed by LC-MS/MS using multiple reaction monitoring. The D-Val substitution can extend the terminal half-life, but published data for this specific configuration is limited; the magnitude of stabilization is sequence-dependent and must be verified against the L-Val counterpart in the same assay. Loss of target potency is assessed separately by receptor binding or enzymatic activity assays.

    The critical operational boundary is that D-Val substitution does not universally improve plasma stability and may reduce manufacturing yield because β-branching slows coupling. If the final peptide exhibits low solubility in aqueous buffer at pH 7.4, formulation requires pH adjustment or a lyophilized acetate salt. Peptide amides containing D-Val are stored at −20°C in glass vials under nitrogen; repeated freeze-thaw cycles above 5 cycles can promote aggregation. In GMP manufacturing, the starting Fmoc-D-valine must have controlled residual solvents according to ICH Q3C and a certificate of analysis demonstrating HPLC purity ≥98.0%, water content ≤1.0%, and enantiomeric purity by chiral HPLC. Process development may evaluate a switch from Fmoc-D-valine to Boc-D-valine only for N-terminal positions where Fmoc deprotection with piperidine would expose an incompatible side-chain protecting group.

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    Certification & Compliance
    More Introduction

    Fmoc-D-valine, listed under CAS 84624-28-2 and linear formula C20H21NO4 with a molecular weight of 339.39 g/mol, is the N-α-9-fluorenylmethoxycarbonyl derivative of D-valine. Peptide-synthesis-grade lots are commonly designated Fmoc-D-Val-OH, N-(9-fluorenylmethoxycarbonyl)-D-valine, or Fmoc-D-valine; catalog identifiers vary by supplier. The product appears as a white to faint-yellow crystalline powder and is employed as a protected building block in Fmoc solid-phase peptide synthesis when a D-configured valine residue is required at a defined sequence position. Representative release data for high-purity material include an HPLC purity of not less than 98.5% area at 254 nm, an enantiomeric excess of not less than 99.0%, and an L-valine impurity below 0.5% by validated chiral HPLC. The monoisotopic mass is 339.147 Da, with [M+H]+ observed at m/z 340.154. Typical downstream uses include SPPS of D-amino-acid-scanned peptides, peptidase-resistant hormone analogs, and enzyme inhibitors in which a D-valine residue is positioned near a proteolytic cleavage site. The material is stored at 2–8 °C in an airtight container protected from light; if opened under relative humidity above 60% for more than 24 h, a drying step at 25–30 °C under vacuum is required before use.

    Base-Labile Fmoc Protection Dictates Deprotection Timing in Automated Synthesizers

    The Fmoc group is removed under non-acidic conditions with secondary-amine bases, most commonly a 20% piperidine solution in DMF. Automated solid-phase synthesizers equipped with UV monitoring at 301 nm use two successive piperidine contacts: an initial short treatment of 2–3 min to eliminate the bulk of the Fmoc cleavage products, followed by a fresh 8–12 min treatment to drive the removal above 99%. Deprotection completeness is checked by UV absorption of the piperidine-dibenzofulvene adduct at 301 nm; incomplete removal is detected by persistent absorbance in the second or third deprotection wash. Prolonged piperidine contact beyond 30 min can trigger diketopiperazine formation at the N-terminal dipeptide stage, especially on resins loaded above 0.6 mmol/g. The use of 20% 4-methylpiperidine in DMF may be substituted for sequences containing aspartimide-prone motifs; deprotection is slower and may require 15–20 min per contact. Fmoc-D-valine is compatible with standard side-chain protecting groups such as tert-butyl, tert-butoxycarbonyl, trityl, and 2,2,4,6,7-pentamethyldihydrobenzofuran-5-sulfonyl because deprotection occurs under basic conditions and leaves acid-labile groups intact.

    At 0.1 mmol scale on a Rink amide AM resin with a loading of 0.35 mmol/g, Fmoc-D-valine is coupled as a 0.3 M DMF solution. Activation with HATU and N,N-diisopropylethylamine at a molar ratio of 1:1:2 relative to the free amino acid is performed for 2 min before transfer to the resin. The reaction is agitated with nitrogen or vortex mixing for 45–60 min at 20–25 °C. Because the valine side chain is β-branched, the first coupling may leave residual free amino groups; a Kaiser test or bromophenol blue test is applied at this point. If resin beads remain blue after the first coupling, a second coupling with fresh activated monomer is applied for 30–45 min. On 0.25 mmol scale, a common synthesizer cartridge loading is 0.5 mmol of Fmoc-D-valine dissolved in 2.0 mL of DMF, yielding a 0.25 M solution. Water content in DMF should be maintained below 0.05% because water competes with resin-bound amine during active-ester acylation and can hydrolyze the reagent.

    What Are the Certificate-of-Analysis Ranges and Identity Tests?

    Quality-control data for Fmoc-D-valine are generated by methods aligned with USP general chapters. The table summarizes representative acceptance ranges for peptide-synthesis-grade material. These values are typical across supplier certificates of analysis, but lot-specific values should be confirmed because impurity profiles can vary with synthetic route.

    ParameterAcceptance rangeGeneral method
    AppearanceWhite to faint-yellow crystalline powderVisual inspection
    IdentificationIR spectrum matches reference; HPLC retention time matches Fmoc-D-valine standardUSP <197>, USP <621>
    Assay by HPLC, anhydrous basis98.5%100.5%USP <621>
    Total related substances1.0%USP <621>
    Enantiomeric purityD-enantiomer ≥99.0%; L-valine ≤0.5%Chiral HPLC
    Melting range143146 °CUSP <741>
    Specific rotation [α]20D in DMF, c=1+16.0° to +18.0°USP <781>
    Water content by Karl Fischer0.5%USP <921> Method Ia
    Residue on ignition0.1%USP <281>
    Monoisotopic mass339.147 Da; [M+H]+ m/z 340.154High-resolution MS

    Specific rotation is solvent-dependent; values in methanol or DMSO may differ from the DMF specification by several degrees. The enantiomeric purity method should separate Fmoc-D-valine from Fmoc-L-valine with a resolution factor of at least 1.5; otherwise an orthogonal method such as chiral SFC or Marfey’s derivatization followed by reversed-phase HPLC is recommended.

    Coupling Reagent Selection and Racemization Boundaries in β-Branched Systems

    Because the valine side chain is β-branched, Fmoc-D-valine reacts more slowly than Fmoc-D-alanine or Fmoc-D-norvaline under equivalent conditions. Uronium or aminium activators such as HATU, HBTU, and PyBOP are preferred over simple carbodiimide/HOBt mixtures in automated protocols because they generate the active ester rapidly and reduce the time that the carboxylate remains exposed to tertiary amine. The recommended activation stoichiometry is Fmoc-D-valine/HATU/DIEA at 1:0.98:2, with a pre-activation time of 1–3 min. Long pre-activation above 10 min can decompose the active ester and lower coupling yield. For carbodiimide-based couplings, DIC with OxymaPure is used at 0.05–0.10 M concentration in DMF; coupling is slower and may require 2 h at room temperature or 30 min at 40 °C. The racemization risk in Fmoc-D-valine during routine activation is low when the pH is maintained near neutral to slightly basic by controlled DIEA addition. If more than 2.5 equivalents of tertiary amine are added, or if the mixture is heated above 35 °C for more than 30 min, the enantiomeric purity should be re-tested by chiral HPLC after work-up. Fmoc-D-valine is not compatible with amine-based additives during storage because the Fmoc group is base-sensitive; contact with triethylamine or morpholine in solution at even 5% concentration initiates deprotection within minutes.

    Storage below 2–8 °C is required to maintain Fmoc stability when the material is retained beyond 12 months. A new bottle should be warmed to room temperature before opening to avoid condensation, and the container should be blanketed with dry nitrogen after each use. At 25 °C and 60% relative humidity, partially opened containers may show gradual Fmoc hydrolysis; Fmoc-D-valine should be used within 6 months after opening if stored under nitrogen. Insoluble particulates in a DMF solution may indicate partial Fmoc loss or salt contamination; such solutions should not be introduced to an automated synthesizer because they can plug 0.2 µm inline filters. Microwave-assisted SPPS may raise coupling temperatures to 40–50 °C; published data for the enantiomeric stability of Fmoc-D-valine under all microwave conditions is limited, so chiral HPLC analysis of the cleaved product is advised for new protocols.

    When Fmoc-D-valine Replaces L-Valine or Boc-D-valine in Sequence-Modified Peptides

    The choice between Fmoc-D-valine and Fmoc-L-valine is determined by the target sequence. Both enantiomers share the same molecular formula, molecular weight, and Fmoc deprotection conditions, but they differ in optical rotation and in their interaction with biological systems. Fmoc-D-valine is used to introduce a non-proteinogenic D-configured valine residue that resists aminopeptidase cleavage and alters the conformational space of the peptide; published data for the metabolic stability of specific sequences containing D-valine is limited and must be generated case by case.

    Property or use parameterFmoc-D-valineFmoc-L-valineBoc-D-valine
    CAS registry number84624-28-268858-20-822838-58-4
    Molecular weight339.39 g/mol339.39 g/mol217.26 g/mol
    Protecting groupFmoc, base-labileFmoc, base-labileBoc, acid-labile
    Deprotection reagent20% piperidine/DMF20% piperidine/DMF40–50% TFA/DCM or 4 M HCl/dioxane
    Main downstream useSPPS at ambient temperatureSPPS at ambient temperatureSolution-phase synthesis or TFA-stable SPPS
    Compatibility with acid-labile resinsCompatibleCompatibleNot compatible; requires TFA-stable or HF-stable resins
    Real-time deprotection monitoringUV absorbance at 301 nmUV absorbance at 301 nmNo strong Fmoc chromophore; ninhydrin or conductivity monitoring required

    Boc-D-valine is a smaller monomer with a lower molecular weight and is often preferred in solution-phase synthesis or in solid-phase strategies that employ TFA-stable linkers. It is not directly interchangeable with Fmoc-D-valine in an Fmoc SPPS protocol because the Boc group remains attached under piperidine treatment and would therefore cap the N-terminus. Conversely, Fmoc-D-valine is not compatible with strongly basic nucleophiles used in some protecting-group removals; it should not be used in sequences where a final saponification at pH above 12 is required. The Fmoc chromophore permits real-time UV monitoring at 301 nm; Boc-protected valine lacks this strong chromophore, so deprotection must be followed by ninhydrin or conductivity monitoring. In process development, the switch from Fmoc-L-valine to Fmoc-D-valine does not require modification of piperidine deprotection or TFA cleavage conditions, but the enantiomeric identity of the final peptide should be verified by chiral amino acid analysis after hydrolysis because retention times in reversed-phase HPLC may be identical for the D- and L-epimers.

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